Publications
@article
Cogo, V., Paulo, J., & Bessani, A. (2021). GenoDedup: Similarity-Based Deduplication and Delta-Encoding for Genome Sequencing Data. IEEE Transactions on Computers (TC) 70(5), 669-681.

Mendes, R., Oliveira, T., Cogo. V., Neves, N., & Bessani, A. (2021). CHARON: A Secure Cloud-of-Clouds System for Storing and Sharing Big Data. IEEE Transactions on Cloud Computing 9(4), 1349-1361. 
Cogo, V., & Bessani, A. (2016). From Data Islands to Sharing Data in the Cloud: the Evolution of Data Integration in Biological Data Repositories. Communications and Innovations Gazette (ComInG) 1(1), 1-11.

Alves, F., Cogo, V., Wandelt, S., Leser, U., & Bessani, A. (2015). On-Demand Indexing for Referential Compression of DNA Sequences. PLoS ONE 10(7), e0132460.

Arantes, L., Lejeune, J., Piffaretti, M., Marin, O., Sens, P., Sopena, J., Bessani, A., Cogo, V., Correia, M., Costa, P., & Pasin, M. (2012). Vers une Plateforme MapReduce Tolerant les Fautes Byzantines. Technique et Science Informatiques. 
@inproceedings
Cogo, V., & Bessani, A. (2021). Brief Announcement: Auditable Register Emulations. In Proceedings of the 35th International Symposium on Distributed Computing (DISC).

Viegas, E., Santin, A., Cogo, V., & Abreu, V. (2020). A Reliable Semi-Supervised Intrusion Detection Model: One Year of Network Traffic Anomalies. In Proceedings of the 2020 IEEE International Conference on Communications (ICC).

Viegas, E., Santin, A., Cogo, V., & Abreu, V. (2020). Facing the Unknown: a Stream Learning Intrusion Detection System for Reliable Model Updates. In Proceedings of the 34th International Conference on Advanced Information Networking and Applications (AINA).

Santos, R., Viegas, E., Santin, A., & Cogo, V. (2020). A Long-lasting Reinforcement Learning Intrusion Detection Model. In Proceedings of the 34th International Conference on Advanced Information Networking and Applications (AINA).

Abreu, V., Santin, A., Viegas, E., & Cogo, V. (2020). Identity and Access Management for IoT in Smart Grid. In Proceedings of the 34th International Conference on Advanced Information Networking and Applications (AINA).

Cogo, V., & Bessani, A. (2019). Enabling the Efficient, Dependable Cloud-based Storage of Human Genomes. In Proceedings of the 1st Workshop on Distributed and Reliable Storage Systems (DRSS'19).

Cogo, V., Bessani, A., Couto, F., Gama-Carvalho, M., Fernandes, M., & Esteves-Verissimo, P. (2017). How can photo sharing inspire sharing genomes?. In Proceedings of the 11th International Conference on Practical Applications of Computational Biology and Bioinformatics (PACBB'17). 
Cogo, V., Bessani, A., Couto, F., & Verissimo, P. (2015). A High-Throughput Method to Detect Privacy-Sensitive Human Genomic Data. In Proceedings of the 14th ACM Workshop on Privacy in the Electronic Society (WPES 2015).

Bessani, A., Brandt, J., Bux, M., Cogo, V., Dimitrova, L., Dowling, J., Gholami, A., Hakimzadeh, K., Hummel, M., Ismail, M., Laure, E., Leser, U., Litton, J., Martinez, R., Reichel, J., Niazi, S., & Zimmermann, K. (2015). BiobankCloud: a Platform for the Secure Storage, Sharing, and Processing of Large Biomedical Data Sets. In Proceedings of the 1st Int. Workshop on Data Management and Analytics for Medicine and Healthcare (DMAH 2015). 
Alves, F., Cogo, V., & Bessani, A. (2014). Indexação sob Demanda para a Compressão Referencial de Ficheiros de ADN. In Proceedings of the 6th Simposio de Informatica (INFORUM). 
Cogo, V., Nogueira, A., Sousa, J., Pasin, M., Reiser, H., & Bessani, A. (2013). FITCH: Supporting Adaptive Replicated Services in the Cloud. In Proceedings of the 13th IFIP International Conference on Distributed Applications and Interoperable Systems (DAIS'13).

Arantes, L., Lejeune, J., Piffaretti, M., Marin, O., Sens, P., Sopena, J., Bessani, A., Cogo, V., Correia, M., Costa, P., Pasin, M., & Silva, F. (2011). Etude d'une Architecture MapReduce Tolerant les Fautes Byzantines. In the 20eme Rencontres francophones du parallelisme (RENPAR'11). 
Bessani, A., Cogo, V., Correia, M., Costa, P., Pasin, M., Silva, F., Arantes, L., Marin, O., Sens, P., & Sopena, J. (2010). Making Hadoop MapReduce Byzantine FaultTolerant. In Supplement of the International Conference on Dependable Systems and Networks (DSN'10). 
Gomes, V., Cogo, V., & Charão, A. (2009). Avaliação de estratégias de Mapeamento de Tarefas para Clusters de Computadores Heterogêneos. In Congresso Regional de Iniciação Científica e Tecnológica em Engenharia (XXIII CRICTE). 
Cogo, V., Gomes, V., Rissetti, G., & Charão, A. (2009). Análise de APIs em Javascript para Criação de Interfaces Web Ricas. In Simpósio de Informática da Região Central do RS (SIRC). 
Pereira, A., Cogo, V., & Charão, A. (2009). Frameworks para Desenvolvimento Rápido de Aplicações Web: um Estudo de Caso com CakePHP e Django. In Workshop de Software Livre (WSL). 
Cogo, V., Viera, M., Tesser, R., Bevilacqua, F., & Charão, A. (2008). Projeto e Implementação de um Mural Digital para Reaproveitamento de Computadores Obsoletos. In Workshop de Software Livre (WSL). 
@preprint
Cogo, V., & Bessani, A. (2019). Auditable Register Emulations. arXiv preprint arXiv:1905.08637. 
@thesis
Cogo, V. (2020). Efficient, Dependable Storage of Human Genome Sequencing Data. Doctoral thesis. Faculty of Sciences, University of Lisbon, PT. 
Cogo, V. (2012). Diversity in automatic cloud computing resource selection. Master's thesis. Faculty of Sciences, University of Lisbon, PT. 
Cogo, V. (2010). Exploração e Benchmarking de uma Implementação de Map Reduce: O Caso do Hadoop na Plataforma Grid'5000. Bachelor's thesis. Universidade Federal de Santa Maria (UFSM), BR. 
@techreport
Ferreira, P., Cogo, V., & Graça, G. (2021). Integrated self-assessment framework. SATO Project, Deliverable D3.8, 19 pages.
Cogo, V., Cecílio, J., Afonso, A., Ferreira, P., Nascimento, A., Gil, A., Ferreira, V., & Fehr, T. (2021). Description of the system architecture of the SATO platform. SATO Project, Deliverable D1.4, 36 pages.
Cogo, V., Ferreira, V., Gil, A., Melo, F., Ferreira, P., Graça, G., & Albuquerque, D. (2021). Concept of the SRI enabled SATO platform. SATO Project, Deliverable D2.1, 20 pages.
Cogo, V., Ferreira, V., Gil, A., Cecílio, J., & Ferreira, P. (2021). SATO Platform, SRI and IT Security Requirements. SATO Project, Deliverable D1.3, 41 pages.
Litton, J., Martinez, R., Reichel, J., Bessani, A., Cogo, V., Mendes, R., & Dimitrova, L. (2015). Disclosure Model. BiobankCloud Project, Deliverable D1.4, 18 pages. 
Bessani, A., Mendes, R., Oliveira, T., & Cogo, V. (2015). Overbank Implementation and Evaluation. BiobankCloud Project, Deliverable D4.3, 40 pages. 
Dowling, J., Niazi, S., Ismail, M., Grohsschmiedt, S., Berthou, G., Mendes, R., Cogo, V., Oliveira, T., & Bessani, A. (2015). Secure, Scalable, Highly-Available Filesystem Integrated with the Object Model and Overbank. BiobankCloud Project, Deliverable D2.4, 71 pages. 
Bessani, A., Mendes, R., Cogo, V., Oliveira, T., Neves, N., & Fonseca, R. (2014). The Overbank Cloud Architecture, Protocols and Middleware. BiobankCloud Project, Deliverable D4.2, 85 pages. 
Bessani, A., Wandelt, S., Bux, M., Starlinger, J., Leser, U., Alves, F., & Cogo, V. (2014). Reference-based Compression Algorithms. BiobankCloud Project, Deliverable D2.2, 94 pages. 
Bessani, A., Cogo, V., Verissimo, P., Mendes, R., Oliveira, T., Fonseca, R., Ramos, F., & Neves, N. (2013). State of the Art and Preliminary Architecture. BiobankCloud Project, Deliverable D4.1, 75 pages. 
Bessani, A., Correia, M., Cogo, V., Neves, N., Pasin, M., Reiser, H., Santos, M., Sousa, J., Verissimo, P., & Cutillo, L. (2013). Adaptive Cloud-of-Clouds Architecture, Services and Protocols. TCLOUDS Project, Deliverable D2.2.4, 128 pages. 
Andre, F., Bessani, A., Cogo, V., Pasin, M., Quaresma, B., Sousa, J., Sousa, P., Basescu, P., Cachin, C., Eyal, I., Haas, R., Junker, B., Knezevic, N., Sorniotti, A., Vukolic, M., Kapitza, R., & Distler, T. (2012). Preliminary Specification of Services and Protocols of Middleware for Adaptive Resilience. TCLOUDS Project, Deliverable D2.2.2, 140 pages. 
@misc
Cogo, V., & Bessani, A. (2016). Efficient Storage of Whole Human Genomes. Poster in the EuroSys 2016, Poster Presentation Award. 
Cogo, V., & Bessani, A. (2014). BiobankCloud Platform as a Service for Biobanking. Poster in the 2nd Annual Next Generation Sequencing Data Congress. 
Bari, W., Cogo, V., Bessani, A., Pasin, M., & Reiser, H. (2010). Fault & Intrusion Tolerance for Cloud Computing. Poster in the XtreemOS Summer School 2010. 
Cogo, V., Pasin, M., & Charão, A. (2010). Running Hadoop on Grid'5000. Tutorial in the Grid'5000 Spring School 2010. 